In a large bowl, whisk together the sugar and eggs until smooth. Add the yogurt, melted unsalted butter, and potato flake starter (or discard). Stir until everything is well combined.
Add in the flour and fold it into the mixture using a spatula. Don’t overmix. Cover the bowl with plastic wrap or beeswax wrap, and let it rest at room temperature for 8–12 hours.
Preheat the oven to 400°F. Line a prepared muffin tin with muffin cups and lightly spritz with nonstick spray if desired.
In a small medium-sized bowl, mix the topping ingredients until crumbly. Set aside.
After fermentation, stir in the baking soda, cinnamon, salt, and vanilla extract
Peel and dice apples. Fold the diced apples in the batter.
Use a 1/4 cup large cookie scoop, spoon a heaping ¼ cup portions of batter into each cup. Top generously with the crumb mixture. This recipe makes about 15 delicious muffins, so bake in batches if needed.
Place muffins in the oven and reduce heat to 375°F. Bake for about 15 minutes, or until the tops are golden brown and a toothpick comes out clean.
Let muffins cool in the tin for 5 minutes, then transfer to a wire rack.
Store muffins in an airtight container at room temperature for 2–3 days, or in the refrigerator for up to a week. Heat them in the microwave for a few seconds before eating.